Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining

by Schwendy, Mischa & 1 more Authors | More information
Information

Macro for cell segmentation using single dye. Dataset contains 3D confocal fluorescence microscopy stacks of stained HeLa cells (24 h culture), differentiated THP-1 cells (1 - 6 days culture) and CHO cells (24 - 48 h culture at 31 and 37 °C). DRAQ5 staining for nuclei (Channel 0) and transmitted laser light (Channel 1).
				
Authors Mischa Schwendy (1), Sapun Parekh (1) Affiliations 1. Max Planck Institute for Polymer Research
Cite as Schwendy, Mischa, Parekh, Sapun. (2018). Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining. Max Planck Society. https://edmond.mpdl.mpg.de/imeji/collection/quuxweXFiBEQnctM Study Type(s) Number of items in this collection 12 Creation date Tue Jul 10 14:13:38 CEST 2018 Last modification date Fri Jul 13 17:01:20 CEST 2018 Date of publication Fri Jul 13 16:59:51 CEST 2018 Permalink https://edmond.mpdl.mpg.de/imeji/collection/quuxweXFiBEQnctM QR-code
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  • Hela.lif
    File name
    Hela.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • Code_withcomments.ijm
    File name
    Code_withcomments.ijm
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • CHO_Day2_37.lif
    File name
    CHO_Day2_37.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • CHO_Day2_31.lif
    File name
    CHO_Day2_31.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • CHO_Day1_37.lif
    File name
    CHO_Day1_37.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • CHO_Day1_31.lif
    File name
    CHO_Day1_31.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • THP_day6.lif
    File name
    THP_day6.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • THP_day5.lif
    File name
    THP_day5.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • THP_day4.lif
    File name
    THP_day4.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • THP_day3.lif
    File name
    THP_day3.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • THP_day2.lif
    File name
    THP_day2.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
  • THP_day1.lif
    File name
    THP_day1.lif
    Collection
    Dataset and FIJI macro for cell segmentation using DRAQ5 cell staining
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